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Hippocampus Research Papers


The hippocampus shrinks in late adulthood, leading to impaired memory and increased risk for dementia. Hippocampal and medial temporal lobe volumes are larger in higher-fit adults, and physical activity training increases hippocampal perfusion, but the extent to which aerobic exercise training can modify hippocampal volume in late adulthood remains unknown. Here we show, in a randomized controlled trial with 120 older adults, that aerobic exercise training increases the size of the anterior hippocampus, leading to improvements in spatial memory. Exercise training increased hippocampal volume by 2%, effectively reversing age-related loss in volume by 1 to 2 y. We also demonstrate that increased hippocampal volume is associated with greater serum levels of BDNF, a mediator of neurogenesis in the dentate gyrus. Hippocampal volume declined in the control group, but higher preintervention fitness partially attenuated the decline, suggesting that fitness protects against volume loss. Caudate nucleus and thalamus volumes were unaffected by the intervention. These theoretically important findings indicate that aerobic exercise training is effective at reversing hippocampal volume loss in late adulthood, which is accompanied by improved memory function.

Deterioration of the hippocampus precedes and leads to memory impairment in late adulthood (1, 2). Strategies to fight hippocampal loss and protect against the development of memory impairment has become an important topic in recent years from both scientific and public health perspectives. Physical activity, such as aerobic exercise, has emerged as a promising low-cost treatment to improve neurocognitive function that is accessible to most adults and is not plagued by intolerable side effects often found with pharmaceutical treatments (3). Exercise enhances learning and improves retention, which is accompanied by increased cell proliferation and survival in the hippocampus of rodents (4–6); effects that are mediated, in part, by increased production and secretion of BDNF and its receptor tyrosine kinase trkB (7, 8).

Aerobic exercise training increases gray and white matter volume in the prefrontal cortex (9) of older adults and increases the functioning of key nodes in the executive control network (10, 11). Greater amounts of physical activity are associated with sparing of prefrontal and temporal brain regions over a 9-y period, which reduces the risk for cognitive impairment (12). Further, hippocampal and medial temporal lobe volumes are larger in higher-fit older adults (13, 14), and larger hippocampal volumes mediate improvements in spatial memory (13). Exercise training increases cerebral blood volume (15) and perfusion of the hippocampus (16), but the extent to which exercise can modify the size of the hippocampus in late adulthood remains unknown.

To evaluate whether exercise training increases the size of the hippocampus and improves spatial memory, we designed a single-blind, randomized controlled trial in which adults were randomly assigned to receive either moderate-intensity aerobic exercise 3 d/wk or stretching and toning exercises that served as a control. We predicted that 1 y of moderate-intensity exercise would increase the size of the hippocampus and that change in hippocampal volume would be associated with increased serum BDNF and improved memory function.


Aerobic Exercise Training Selectively Increases Hippocampal Volume.

One hundred twenty older adults without dementia (Table 1) were randomly assigned to an aerobic exercise group (n = 60) or to a stretching control group (n = 60). Magnetic resonance images were collected before the intervention, after 6 mo, and again after the completion of the program. The groups did not differ at baseline in hippocampal volume or attendance rates (Table 2 and SI Results). We found that the exercise intervention was effective at increasing the size of the hippocampus. That is, the aerobic exercise group demonstrated an increase in volume of the left and right hippocampus by 2.12% and 1.97%, respectively, over the 1-y period, whereas the stretching control group displayed a 1.40% and 1.43% decline over this same interval (Fig. 1A). The moderating effect of aerobic exercise on hippocampal volume loss was confirmed by a significant Time × Group interaction for both the left [F(2,114) = 8.25; P < 0.001; ηp2 = 0.12] and right [F(2,114) = 10.41; P < 0.001; ηp2 = 0.15] hippocampus (see Table 2 for all means and SDs).

Fig. 1.

(A) Example of hippocampus segmentation and graphs demonstrating an increase in hippocampus volume for the aerobic exercise group and a decrease in volume for the stretching control group. The Time × Group interaction was significant (P < 0.001) for both left and right regions. (B) Example of caudate nucleus segmentation and graphs demonstrating the changes in volume for both groups. Although the exercise group showed an attenuation of decline, this did not reach significance (both P > 0.10). (C) Example of thalamus segmentation and graph demonstrating the change in volume for both groups. None of the changes were significant for the thalamus. Error bars represent SEM.

As can be seen in Fig. 2, we found that aerobic exercise selectively increased the volume of the anterior hippocampus that included the dentate gyrus, where cell proliferation occurs (4, 6, 8), as well as subiculum and CA1 subfields, but had a minimal effect on the volume of the posterior section. Cells in the anterior hippocampus mediate acquisition of spatial memory (17) and show more age-related atrophy compared with the tail of the hippocampus (18, 19). The selective effect of aerobic exercise on the anterior hippocampus was confirmed by a significant Time × Group × Region interaction for both the left [F(2,114) = 4.05; P < 0.02; ηp2 = 0.06] and right [F(2,114) = 4.67; P < 0.01; ηp2 = 0.07] hippocampus. As revealed by t tests, the aerobic exercise group showed an increase in anterior hippocampus volume from baseline to after intervention [left: t(2,58) = 3.38; P < 0.001; right: t(2,58) = 4.33; P < 0.001] but demonstrated no change in the volume of the posterior hippocampus (both P > 0.10). In contrast, the stretching control group demonstrated a selective decline in volume from baseline to after intervention for the anterior hippocampus [left: t(2,58) = −3.07; P < 0.003; right: t(2,58) = −2.45; P < 0.01] but no significant change in volume for the posterior hippocampus (both P > 0.20).

Fig. 2.

The exercise group showed a selective increase in the anterior hippocampus and no change in the posterior hippocampus. See Table 2 for Means and SDs.

The regional specificity of the intervention was investigated further by examining two regions that served as control: thalamus and caudate nucleus. The volume of the thalamus increased for both the aerobic exercise and stretching groups (Fig. 1C), but this increase was not significant [F(2,114) = 0.65; P < 0.52]. Aerobic exercise did not moderate the increase in thalamic volume, as demonstrated by a nonsignificant Time × Group interaction [F(2,114) = 0.24; P < 0.80]. The volume of both the left and right caudate nucleus declined (Fig. 1B), but only for the stretching group. Aerobic exercise attenuated the loss of volume, although the Time × Group interaction was not significant for either the left [F(2,114) = 2.25; P < 0.11; ηp2 = 0.03] or right [F(2,114) = 1.63; P < 0.19; ηp2 = 0.02] hemispheres.

Our results demonstrate that the size of the hippocampus is modifiable in late adulthood and that moderate-intensity aerobic exercise is effective at reversing volume loss. Increased volume with exercise occurred in a selective fashion, influencing the anterior hippocampus but not the posterior hippocampus or the thalamus or caudate nucleus.

Table 1.

Characteristics for the aerobic exercise and stretching control groups

Table 2.

Means (SD) for both groups at all three time points

Changes in Fitness Are Associated with Increased Hippocampal Volume.

The intervention was effective at increasing aerobic fitness levels. The aerobic exercise group showed a 7.78% improvement in maximal oxygen consumption (VO2 max) after the intervention, whereas the stretching control group showed a 1.11% improvement in VO2 max (Table 1). This difference between the groups was confirmed by a Time × Group interaction [F(2,111) = 4.42; P < 0.01; ηp2 = 0.07]. We examined whether improvements in fitness levels were associated with the magnitude of the change in hippocampal volume. To test this, we ran correlations between change in aerobic fitness levels and change in hippocampal volume, collapsing across both groups of participants. We found that greater improvements in aerobic fitness level over the 1-y interval were associated with greater increases in hippocampal volume for the left (r = 0.37; P < 0.001) and right (r = 0.40; P < 0.001) hemispheres, suggesting that larger changes in fitness translate to larger changes in volume (Fig. 3 A and B). This result is consistent with several rodent studies of exercise on neurogenesis and BDNF (20, 21). Improvements in VO2 max were correlated with increases in both anterior (left: r = 0.28; P < 0.001; right: r = 0.51; P < 0.001) and posterior (left: r = 0.32; P < 0.001; right: r = 0.39; P < 0.001) hippocampal regions, indicating that changes in aerobic fitness have a global influence on hippocampal volume. Correlations between changes in VO2 max and change in caudate nucleus and thalamic volumes were not significant (all r < 0.14; P > 0.10).

Fig. 3.

All scatterplots are of the aerobic exercise group only because it was the only group that showed an increase in volume across the intervention. (A and B) Scatterplots of the association between percent change in left and right hippocampus volume and percent change in aerobic fitness level from baseline to after intervention. (C and D) Scatterplots of percent change in left and right hippocampus volume and percent change in BDNF levels. (E and F) Scatterplots of percent change in left and right hippocampus and percent change in memory performance.

We reasoned that if higher physical fitness is protective against the loss of brain tissue, then higher fitness levels at baseline would be predictive of less volume loss over the 1-y period. We examined the participants that declined in volume in the stretching group to test this hypothesis, because the stretching group, and not the aerobic exercise group, showed a decline in hippocampal volume over the 1-y interval. We found results partially consistent with this prediction. That is, higher fitness levels at baseline were associated with less hippocampal volume loss over the 1-y interval, for the right (r = 0.50; P < 0.002) but not for the left (r = 0.17; P < 0.30) hippocampus. Further, consistent with our expectations, it was only the right anterior hippocampus (r = 0.48; P < 0.003) that was protected by higher fitness levels at baseline; the posterior hippocampus was not affected by baseline fitness (r = 0.21; P > 0.20).

BDNF Is Associated with Changes in Hippocampal Volume.

Exercise increases levels of BDNF in the hippocampus (5, 7, 20), which, along with the trkB receptor, is considered to be a partial mediator of the enhancing effect of exercise on learning and memory (7, 8). BDNF can be measured in serum, and higher serum levels of BDNF are associated with both better memory function and larger hippocampal volumes (22). Here, we examined whether 1 y of aerobic exercise would change circulating levels of BDNF and whether increased hippocampal volume would be correlated with changes in BDNF. The aerobic exercise group did not demonstrate greater changes in serum BDNF levels compared with the stretching group, as indicated by a nonsignificant Time × Group interaction [F(1,97) = 1.42; P < 0.23; ηp2 = 0.01]. We reasoned, however, that because BDNF mediates cell proliferation in the dentate gyrus of the hippocampus, increased hippocampal volume could be associated with increased levels of serum BDNF. Because the aerobic exercise group was the only group to show an increase in volume over the 1-y period, we ran a correlation between change in BDNF and change in hippocampal volume for the aerobic exercise group to test this hypothesis. We found that greater changes in serum BDNF were associated with greater increases in volume for the left (r = 0.36; P < 0.01) and for the right (r = 0.37; P < 0.01) hippocampus (Fig. 3 C and D). Further, these effects were selective for the left (r = 0.30; P < 0.03) and right anterior hippocampus (r = 0.27; P < 0.04) and only marginal with the left (r = 0.25; P < 0.06) and right (r = 0.22; P < 0.08) posterior hippocampus. There were no associations between changes in serum BDNF and changes in caudate nucleus or thalamus volumes (all P > 0.50); nor were there any associations between hippocampal volume and serum BDNF for the stretching control group (all P > 0.40). This indicates that exercise-induced increases in BDNF are selectively related to the changes in anterior hippocampal volume resulting from aerobic exercise.

Hippocampal Volume Is Related to Improvements in Spatial Memory.

Spatial memory (13, 22) was tested on both exercise and stretching groups at baseline, after 6 mo, and again after the completion of the 1-y intervention to determine whether changes in hippocampal volume translate to improved memory. Both groups showed improvements in memory, as demonstrated by significant increases in accuracy between the first and last testing sessions for the aerobic exercise [t(2,51) = 2.08; P < 0.05] and the stretching control [t(2,54) = 4.41; P < 0.001] groups. Response times also became faster for both groups between the baseline and postintervention sessions (all P < 0.01), indicating that improvements in accuracy were not caused by changes in speed–accuracy tradeoff. However, the aerobic exercise group did not improve performance above that achieved by the stretching control group, as demonstrated by a nonsignificant Time × Group interaction [F(1,102) = 0.67; P < 0.40; ηp2 = 0.007]. Nonetheless, we found that higher aerobic fitness levels at baseline (r = 0.31; P < 0.001) and after intervention (r = 0.28; P < 0.004) were associated with better memory performance on the spatial memory task. Change in aerobic fitness levels from baseline to after intervention, however, was not related to improvements in memory for either the entire sample (r = 0.15; P < 0.12) or when considering each group separately (both P > 0.05). Furthermore, changes in BDNF were not associated with improvements in memory function for either group (r < 0.15; P > 0.20). On the other hand, larger left and right hippocampi at baseline (both P < 0.005) and after intervention (both P < 0.005) were associated with better memory performance (12). Therefore, we reasoned that increased hippocampal volume after the exercise intervention should translate to improved memory function. In support of this hypothesis, we found that, in the aerobic exercise group, increased hippocampal volume was directly related to improvements in memory performance. The correlation between improvement in memory and hippocampal volume reached significance for left (r = 0.23; P < 0.05) and right (r = 0.29; P < 0.02) hemispheres (Fig. 3 E and F). This indicates that increases in hippocampal volume after 1 y of exercise augments memory function in late adulthood. In contrast, changes in caudate nucleus and thalamus volumes were unrelated to changes in memory performance for either group (all P > 0.10).


Hippocampal volume shrinks 1–2% annually in older adults without dementia (1), and this loss of volume increases the risk for developing cognitive impairment (2). We find results consistent with this pattern, such that the stretching control group demonstrated a 1.4% decline in volume over the 1-y interval. With escalating health care costs and an increased proportion of people aged >65 y, it is imperative that low-cost, accessible preventions and treatments for brain tissue loss are discovered. In this randomized controlled study of exercise training, we demonstrate that loss of hippocampal volume in late adulthood is not inevitable and can be reversed with moderate-intensity exercise. A 1-y aerobic exercise intervention was effective at increasing hippocampal volume by 2% and offsetting the deterioration associated with aging. Because hippocampal volume shrinks 1–2% annually, a 2% increase in hippocampal volume is equivalent to adding between 1 and 2 y worth of volume to the hippocampus for this age group.

On the basis of the several regions we examined, the effect of exercise was rather selective, influencing only the anterior hippocampus and neither the thalamus nor the caudate nucleus. This indicates that exercise does not influence all brain regions uniformly. In fact, research from human cognitive studies and rodents indicates some specificity, such that exercise influences some brain regions and behaviors but has minimal influence on others (3, 5, 9, 12, 20, 21, 23–25). Such selectivity suggests that there are regionally dependent molecular pathways influenced by exercise. In fact, we found here that changes in serum BDNF levels were associated with changes in anterior hippocampal volume; an important link because the hippocampus is rich in BDNF, and BDNF levels increase with exercise treatments in both rodents (5, 7, 20) and humans (26, 27). BDNF is a putative mediator of neurogenesis and contributes to dendritic expansion (28, 29) and is also critical in memory formation (30–32). Our results suggest that cell proliferation or increased dendritic branching might explain increased hippocampal volume and improvements in memory after exercise; however, increased vascularization (15, 16, 33) and dendritic complexity (34) may also be contributing to increased volume.

Aerobic exercise increased anterior hippocampal volume but had little effect on the posterior hippocampus. Neurons in the anterior hippocampus are selectively associated with spatial memory acquisition (17) and show exacerbated age-related atrophy compared with the posterior hippocampus (18, 19). It is possible that regions demonstrating less age-related decay might also be less amenable to growth. Thus, aerobic exercise might elicit the greatest changes in regions that show the most precipitous decline in late adulthood, such as the anterior hippocampus and prefrontal cortex (9). Overall, these data suggest that the anterior hippocampus remains amenable to augmentation.

In sum, we found that the hippocampus remains plastic in late adulthood and that 1 y of aerobic exercise was sufficient for enhancing volume. Increased hippocampal volume translates to improved memory function and higher serum BDNF. We also demonstrate that higher fitness levels are protective against loss of hippocampal volume. These results clearly indicate that aerobic exercise is neuroprotective and that starting an exercise regimen later in life is not futile for either enhancing cognition or augmenting brain volume.



Community-dwelling older adults (n = 842) were recruited, and 179 were enrolled. One hundred forty-five participants completed the intervention (81.0% of the participants originally enrolled). Five participants were excluded because they did not attend the 6-mo MRI session, owing to scheduling conflicts; eight participants were excluded because they did not attend the 12-mo follow-up MRI session; and 12 participants were excluded because they had excessive head motion that created inaccurate hippocampal, caudate nucleus, or thalamus segmentations. Therefore, 120 participants had complete MR data from all three sessions (82.7% of the enrolled sample) and were included in the analyses.

Eligible participants had to (i) demonstrate strong right handedness (35), (ii) be between the ages of 55 and 80 y, (iii) score ≥51 on the modified Mini-Mental Status Examination (36), (iv), score <3 on the Geriatric Depression Scale to rule out possible depression (37), (v) have normal color vision, (vi) have a corrected visual acuity of at least 20/40, (vii) have no history of neurological diseases or infarcts, including Parkinson's disease, Alzheimer's disease, multiple sclerosis, or stroke, (viii) have no history of major vasculature problems, including cardiovascular disease or diabetes, (ix) obtain consent from their personal physician, and (x) sign an informed consent form approved by the University of Illinois. In addition, all participants had to report being currently sedentary, defined as being physically active for 30 min or less in the last 6 mo. Participants were compensated for their participation.

After completion of the initial blood draw, MR session, and fitness assessment, participants were randomized to an aerobic walking group (n = 60) or a stretching control group (n = 60) (Fig. 4).

Fig. 4.

Flow diagram for the randomization and assessment sessions for both exercise and stretching control groups.

Fitness Assessments.

Participants were required to obtain consent from their personal physician before cardiorespiratory fitness testing was conducted. Aerobic fitness (VO2 max) was assessed by graded maximal exercise testing on a motor-driven treadmill. The participant walked at a speed slightly faster than their normal walking pace (≈30–100 m/min), with increasing grade increments of 2% every 2 min. A cardiologist and nurse continuously monitored oxygen uptake, heart rate, and blood pressure (see SI Methods for more detail).

MRI Parameters and Segmentation Algorithm.

MR images were collected on all participants within 1 mo of the start of the intervention, after 6 mo, and within 2 wk after the completion of the intervention. High-resolution (1.3 mm × 1.3 mm × 1.3 mm) T1-weighted brain images were acquired using a 3D magnetization-prepared rapid gradient echo imaging protocol with 144 contiguous slices collected in an ascending fashion.

For segmentation and volumetric analysis of the left and right hippocampus, caudate nucleus, and thalamus we used the Oxford Centre for Functional MRI of the Brain (FMRIB)’s Integrated Registration and Segmentation Tool in FMRIB's Software Library version 4.1 (38–40) (see SI Methods for more detail).

Training Protocol.

Aerobic exercise condition.

For the aerobic exercise program, a trained exercise leader supervised all sessions. Participants started by walking for 10 min and increased walking duration weekly by 5-min increments until a duration of 40 min was achieved at week 7. Participants walked for 40 min per session for the remainder of the program. All walking sessions started and ended with approximately 5 min of stretching for the purpose of warming up and cooling down. Participants wore heart rate monitors and were encouraged to walk in their target heart rate zone, which was calculated using the Karvonen method (41) according to the resting and maximum heart rates achieved during the baseline maximal graded exercise test. The target heart rate zone was 50–60% of the maximum heart rate reserve for weeks 1 to 7 and 60–75% for the remainder of the program. Participants in the walking group completed an exercise log at each exercise session. Every 4 wk, participants received written feedback forms that summarized the data from their logs. Participants with low attendance and/or exercise heart rate were encouraged to improve their performance in the following month.

Stretching and toning control condition.

For the stretching and toning control program, all sessions were led and monitored by trained exercise leaders. All classes started and ended with warm-up and cool-down stretching. During each class, participants engaged in four muscle-toning exercises using dumbbells or resistance bands, two exercises designed to improve balance, one yoga sequence, and one exercise of their choice. To maintain interest, a new group of exercises was introduced every 3 wk. During the first week, participants focused on becoming familiar with the new exercises, and during the second and third weeks they were encouraged to increase the intensity by using more weight or adding more repetitions. Participants in the stretching and toning control group also completed exercise logs at each exercise session and received monthly feedback forms. They were encouraged to exercise at an appropriate intensity of 13–15 on the Borg Rating of Perceived Exertion scale (42) and to attend as many classes as possible.

Spatial Memory Paradigm.

To test memory function, all participants completed a computerized spatial memory task at baseline, after 6 mo, and again after completion of the intervention (13, 22, 43).

A fixation crosshair appeared for 1 s, and participants were instructed to keep their eyes on the crosshair. After the fixation, one, two, or three black dots appeared at random locations on the screen for 500 ms. The dots were removed from the display for 3 s. During this time, participants were instructed to try and remember the locations of the previously presented black dots. At the end of the 3-s delay, a red dot appeared on the screen in either one of the same locations as the target dots (match condition) or at a different location (nonmatch condition). Participants had 2 s to respond to the red dot by pressing one of two keys on a standard keyboard—the “x” key for a nonmatch trial and the “m” key for a match trial (Fig. 5). Forty trials were presented for each set size (one, two, or three locations), with 20 trials as match trials and 20 trials as nonmatch trials. Participants were instructed to respond as quickly and accurately as possible. Several practice trials were performed before the task began to acquaint the participants with the task instructions and responses (see SI Methods for more detail).

Fig. 5.

Display of the spatial memory task used in this study. The spatial memory task load was parametrically manipulated between one, two, or three items (two-item condition shown here). Participants were asked to remember the locations of one, two, or three black dots. After a brief delay, a red dot appeared, and participants were asked to respond whether the location of the red dot matched or did not match one of the locations of the previously shown black dots. This task was administered to all participants at baseline, after 6 mo, and again after completion of the intervention.

Serum BDNF Assay.

Blood was collected at baseline before the intervention and again immediately after the completion of the program. Blood sampling for BDNF analysis was performed approximately 2 wk before the MR sessions. Fasted subjects reported to the laboratory at 0800 hours, at which time blood from the antecubital vein was collected in sterile serum separator tubes (Becton Dickinson). The blood samples were kept at room temperature for 15 min to allow for clotting, after which the samples were centrifuged at 1,100 × g at 4 °C for 15 min. Serum was then harvested, aliquoted, and stored at −80 °C until analysis. Serum BDNF was quantified using an enzyme-linked immunosorbant assay (Human BDNF Quantikine Immunoassay, DBD00, R & D Systems) according to the manufacturer's instructions (see SI Methods for more detail).


All dependent variables were tested and met criteria for normality and skew before general linear model and Pearson correlations were conducted. Effects of the intervention on VO2

When we visit a friend or go to the beach, our brain stores a short-term memory of the experience in a part of the brain called the hippocampus. Those memories are later “consolidated” — that is, transferred to another part of the brain for longer-term storage.

A new MIT study of the neural circuits that underlie this process reveals, for the first time, that memories are actually formed simultaneously in the hippocampus and the long-term storage location in the brain’s cortex. However, the long-term memories remain “silent” for about two weeks before reaching a mature state.

“This and other findings in this paper provide a comprehensive circuit mechanism for consolidation of memory,” says Susumu Tonegawa, the Picower Professor of Biology and Neuroscience, the director of the RIKEN-MIT Center for Neural Circuit Genetics at the Picower Institute for Learning and Memory, and the study’s senior author.

The findings, which appear in Science on April 6, may force some revision of the dominant models of how memory consolidation occurs, the researchers say.

The paper’s lead authors are research scientist Takashi Kitamura, postdoc Sachie Ogawa, and graduate student Dheeraj Roy. Other authors are postdocs Teruhiro Okuyama and Mark Morrissey, technical associate Lillian Smith, and former postdoc Roger Redondo.

Long-term storage

Beginning in the 1950s, studies of the famous amnesiac patient Henry Molaison, then known only as Patient H.M., revealed that the hippocampus is essential for forming new long-term memories. Molaison, whose hippocampus was damaged during an operation meant to help control his epileptic seizures, was no longer able to store new memories after the operation. However, he could still access some memories that had been formed before the surgery.

This suggested that long-term episodic memories (memories of specific events) are stored outside the hippocampus. Scientists believe these memories are stored in the neocortex, the part of the brain also responsible for cognitive functions such as attention and planning.

Neuroscientists have developed two major models to describe how memories are transferred from short- to long-term memory. The earliest, known as the standard model, proposes that short-term memories are initially formed and stored in the hippocampus only, before being gradually transferred to long-term storage in the neocortex and disappearing from the hippocampus.

A more recent model, the multiple trace model, suggests that traces of episodic memories remain in the hippocampus. These traces may store details of the memory, while the more general outlines are stored in the neocortex.

Until recently, there has been no good way to test these theories. Most previous studies of memory were based on analyzing how damage to certain brain areas affects memories. However, in 2012, Tonegawa’s lab developed a way to label cells called engram cells, which contain specific memories. This allows the researchers to trace the circuits involved in memory storage and retrieval. They can also artificially reactivate memories by using optogenetics, a technique that allows them to turn target cells on or off using light.

In the new Science study, the researchers used this approach to label memory cells in mice during a fear-conditioning event — that is, a mild electric shock delivered when the mouse is in a particular chamber. Then, they could use light to artificially reactivate these memory cells at different times and see if that reactivation provoked a behavioral response from the mice (freezing in place). The researchers could also determine which memory cells were active when the mice were placed in the chamber where the fear conditioning occurred, prompting them to naturally recall the memory.

The researchers labeled memory cells in three parts of the brain: the hippocampus, the prefrontal cortex, and the basolateral amygdala, which stores memories’ emotional associations.

Just one day after the fear-conditioning event, the researchers found that memories of the event were being stored in engram cells in both the hippocampus and the prefrontal cortex. However, the engram cells in the prefrontal cortex were “silent” — they could stimulate freezing behavior when artificially activated by light, but they did not fire during natural memory recall.

“Already the prefrontal cortex contained the specific memory information,” Kitamura says. “This is contrary to the standard theory of memory consolidation, which says that you gradually transfer the memories. The memory is already there.”

Over the next two weeks, the silent memory cells in the prefrontal cortex gradually matured, as reflected by changes in their anatomy and physiological activity, until the cells became necessary for the animals to naturally recall the event. By the end of the same period, the hippocampal engram cells became silent and were no longer needed for natural recall. However, traces of the memory remained: Reactivating those cells with light still prompted the animals to freeze.

In the basolateral amygdala, once memories were formed, the engram cells remained unchanged throughout the course of the experiment. Those cells, which are necessary to evoke the emotions linked with particular memories, communicate with engram cells in both the hippocampus and the prefrontal cortex.

Theory revision

The findings suggest that traditional theories of consolidation may not be accurate, because memories are formed rapidly and simultaneously in the prefrontal cortex and the hippocampus on the day of training.

“They’re formed in parallel but then they go different ways from there. The prefrontal cortex becomes stronger and the hippocampus becomes weaker,” Morrissey says.

“This paper shows clearly that from the get-go, engrams are formed in the prefrontal cortex,” says Paul Frankland, a principal investigator in the Neurobiology Laboratory at the Hospital for Sick Children in Toronto, who was not involved in the study. “It challenges the notion that there’s a movement of the memory trace from the hippocampus to the cortex, and makes the point that these circuits are engaged together at the same time. As the memories age, there’s a shift in the balance of which circuit is engaged as a memory is recalled.”

Further studies are needed to determine whether memories fade completely from hippocampal cells or if some traces remain. Right now, the researchers can only monitor engram cells for about two weeks, but they are working on adapting their technology to work for a longer period.

Kitamura says he believes that some trace of memory may stay in the hippocampus indefinitely, storing details that are retrieved only occasionally. “To discriminate two similar episodes, this silent engram may reactivate and people can retrieve the detailed episodic memory, even at very remote time points,” he says.

The researchers also plan to further investigate how the prefrontal cortex engram maturation process occurs. This study already showed that communication between the prefrontal cortex and the hippocampus is critical, because blocking the circuit connecting those two regions prevented the cortical memory cells from maturing properly.

The research was funded by the RIKEN Brain Science Institute, the Howard Hughes Medical Institute, and the JPB Foundation.

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